Prediction of membrane protein topology from first principles
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SCAMPI allows for requests of up to 100,000 protein sequences, and is appropriate for large benchmark sets and full proteome scans. If you have only one or a few sequences, use the TOPCONS server for better predictive performance.
SCAMPI can typically process around 20,000 protein sequences per minute, but may take longer, depending on server load.
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Enter up to 1,000 protein sequences in FASTA format
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SCAMPI:
Prediction of membrane-protein topology from first principles. Andreas Bernsel, Håkan Viklund, Jenny Falk, Erik Lindahl, Gunnar von Heijne and Arne Elofsson (2008) Proc. Natl. Acad. Sci. USA. 105, 7177-7181. [Pubmed]
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